The Freezing of Random RNA

Michael Lässig1, Kay Jörg Wiese1,2
1Institut für theoretische Physik, Universität zu Köln, Zülpicher Str. 77, 50937 Köln, Germany
2CNRS-Laboratoire de Physique Théorique de l'Ecole Normale Supérieure, 24 rue Lhomond, 75005 Paris, France

Abstract

We study secondary structures of random RNA molecules by means of a renormalized field theory based on an expansion in the sequence disorder. We show that there is a continuous phase transition from a molten phase at higher temperatures to a low-temperature glass phase. The primary freezing occurs above the critical temperature, with local islands of stable folds forming within the molten phase. The size of these islands defines the correlation length of the transition. Our results include critical exponents at the transition and in the glass phase.


q-bio.BM/0511032 [pdf]
Phys. Rev. Lett. 96 (2006) 228101 [pdf]


Copyright (C) by Kay Wiese. Last edited March 17, 2008.